IL_4JI4_069
3D structure
- PDB id
- 4JI4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.69 Å
Loop
- Sequence
- GACAACC*GGCUAAUC
- Length
- 15 nucleotides
- Bulged bases
- 4JI4|1|A|U|173
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4JI4_069 not in the Motif Atlas
- Homologous match to IL_6CZR_121
- Geometric discrepancy: 0.1873
- The information below is about IL_6CZR_121
- Detailed Annotation
- tWH-tWH-tHW-tHW
- Broad Annotation
- No text annotation
- Motif group
- IL_80604.5
- Basepair signature
- cWW-L-R-tWH-tWH-tHW-L-R-cWW
- Number of instances in this motif group
- 4
Unit IDs
4JI4|1|A|G|148
4JI4|1|A|A|149
4JI4|1|A|C|150
4JI4|1|A|A|151
4JI4|1|A|A|152
4JI4|1|A|C|153
4JI4|1|A|C|154
*
4JI4|1|A|G|167
4JI4|1|A|G|168
4JI4|1|A|C|169
4JI4|1|A|U|170
4JI4|1|A|A|171
4JI4|1|A|A|172
4JI4|1|A|U|173
4JI4|1|A|C|174
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain T
- RIBOSOMAL PROTEIN S20
Coloring options: