IL_4JI5_044

3D structure

PDB id

4JI5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of 30S ribosomal subunit from Thermus thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

3.85 Å

Loop

Sequence

UAGGGAACCC*GGGGUGCCCCGCGAGGGGAGCCCUA

Length

35 nucleotides

Bulged bases

4JI5|1|A|C|1030|||B, 4JI5|1|A|A|1030|||D

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4JI5|1|A|U|1000
4JI5|1|A|A|1001
4JI5|1|A|G|1002
4JI5|1|A|G|1003
4JI5|1|A|G|1003|||A
4JI5|1|A|A|1004
4JI5|1|A|A|1005
4JI5|1|A|C|1006
4JI5|1|A|C|1007
4JI5|1|A|C|1008
*
4JI5|1|A|G|1021
4JI5|1|A|G|1022
4JI5|1|A|G|1023
4JI5|1|A|G|1024
4JI5|1|A|U|1025
4JI5|1|A|G|1026
4JI5|1|A|C|1027
4JI5|1|A|C|1028
4JI5|1|A|C|1029
4JI5|1|A|C|1030
4JI5|1|A|G|1030|||A
4JI5|1|A|C|1030|||B
4JI5|1|A|G|1030|||C
4JI5|1|A|A|1030|||D
4JI5|1|A|G|1031
4JI5|1|A|G|1032
4JI5|1|A|G|1033
4JI5|1|A|G|1034
4JI5|1|A|A|1035
4JI5|1|A|G|1036
4JI5|1|A|C|1037
4JI5|1|A|C|1038
4JI5|1|A|C|1039
4JI5|1|A|U|1040
4JI5|1|A|A|1041

Current chains

Chain A

16S rRNA

Nearby chains