IL_4JI6_040

3D structure

PDB id

4JI6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of 30S ribosomal subunit from Thermus thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

3.55 Å

Loop

Sequence

GGGAACCCG*UGGGGUGCCCCGCGAGGGGAGCCC

Length

33 nucleotides

Bulged bases

4JI6|1|A|C|1030|||B

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4JI6|1|A|G|1002
4JI6|1|A|G|1003
4JI6|1|A|G|1003|||A
4JI6|1|A|A|1004
4JI6|1|A|A|1005
4JI6|1|A|C|1006
4JI6|1|A|C|1007
4JI6|1|A|C|1008
4JI6|1|A|G|1009
*
4JI6|1|A|U|1020
4JI6|1|A|G|1021
4JI6|1|A|G|1022
4JI6|1|A|G|1023
4JI6|1|A|G|1024
4JI6|1|A|U|1025
4JI6|1|A|G|1026
4JI6|1|A|C|1027
4JI6|1|A|C|1028
4JI6|1|A|C|1029
4JI6|1|A|C|1030
4JI6|1|A|G|1030|||A
4JI6|1|A|C|1030|||B
4JI6|1|A|G|1030|||C
4JI6|1|A|A|1030|||D
4JI6|1|A|G|1031
4JI6|1|A|G|1032
4JI6|1|A|G|1033
4JI6|1|A|G|1034
4JI6|1|A|A|1035
4JI6|1|A|G|1036
4JI6|1|A|C|1037
4JI6|1|A|C|1038
4JI6|1|A|C|1039

Current chains

Chain A

16S rRNA

Nearby chains