IL_4JV5_050

3D structure

PDB id

4JV5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structures of pseudouridinilated stop codons with ASLs

Experimental method

X-RAY DIFFRACTION

Resolution

3.16 Å

Loop

Sequence

UACAAAG*CAAAAAG

Length

14 nucleotides

Bulged bases

4JV5|1|A|A|1248

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4JV5|1|A|U|1247
4JV5|1|A|A|1248
4JV5|1|A|C|1249
4JV5|1|A|A|1250
4JV5|1|A|A|1251
4JV5|1|A|A|1252
4JV5|1|A|G|1253
*
4JV5|1|A|C|1284
4JV5|1|A|A|1285
4JV5|1|A|A|1286
4JV5|1|A|A|1287
4JV5|1|A|A|1288
4JV5|1|A|A|1289
4JV5|1|A|G|1290

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain G

30S ribosomal protein S7

Chain I

30S ribosomal protein S9

Chain J

30S ribosomal protein S10

Chain N

30S ribosomal protein S14

Chain U

30S ribosomal protein THX