IL_4JYA_041

3D structure

PDB id

4JYA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structures of pseudouridinilated stop codons with ASLs

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

UAGGGAAC*GGUGCCCCGCGAGGGGAGCCCUA

Length

31 nucleotides

Bulged bases

4JYA|1|A|G|1012, 4JYA|1|A|A|1013, 4JYA|1|A|G|1017

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4JYA|1|A|U|978
4JYA|1|A|A|979
4JYA|1|A|G|980
4JYA|1|A|G|981
4JYA|1|A|G|982
4JYA|1|A|A|983
4JYA|1|A|A|984
4JYA|1|A|C|985
*
4JYA|1|A|G|1002
4JYA|1|A|G|1003
4JYA|1|A|U|1004
4JYA|1|A|G|1005
4JYA|1|A|C|1006
4JYA|1|A|C|1007
4JYA|1|A|C|1008
4JYA|1|A|C|1009
4JYA|1|A|G|1010
4JYA|1|A|C|1011
4JYA|1|A|G|1012
4JYA|1|A|A|1013
4JYA|1|A|G|1014
4JYA|1|A|G|1015
4JYA|1|A|G|1016
4JYA|1|A|G|1017
4JYA|1|A|A|1018
4JYA|1|A|G|1019
4JYA|1|A|C|1020
4JYA|1|A|C|1021
4JYA|1|A|C|1022
4JYA|1|A|U|1023
4JYA|1|A|A|1024

Current chains

Chain A

16S ribosomal RNA

Nearby chains