IL_4JYA_048

3D structure

PDB id

4JYA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structures of pseudouridinilated stop codons with ASLs

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

AGUUGC*GGCACUCU

Length

14 nucleotides

Bulged bases

4JYA|1|A|U|1108

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4JYA|1|A|A|1106
4JYA|1|A|G|1107
4JYA|1|A|U|1108
4JYA|1|A|U|1109
4JYA|1|A|G|1110
4JYA|1|A|C|1111
*
4JYA|1|A|G|1126
4JYA|1|A|G|1127
4JYA|1|A|C|1128
4JYA|1|A|A|1129
4JYA|1|A|C|1130
4JYA|1|A|U|1131
4JYA|1|A|C|1132
4JYA|1|A|U|1133

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain I

30S ribosomal protein S9

Chain J

30S ribosomal protein S10