IL_4JYA_049
3D structure
- PDB id
- 4JYA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structures of pseudouridinilated stop codons with ASLs
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CUGC*GAGGAAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4JYA_049 not in the Motif Atlas
- Homologous match to IL_5J7L_053
- Geometric discrepancy: 0.15
- The information below is about IL_5J7L_053
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_42032.1
- Basepair signature
- cWW-cSH-cWW-tWH-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
4JYA|1|A|C|1141
4JYA|1|A|U|1142
4JYA|1|A|G|1143
4JYA|1|A|C|1144
*
4JYA|1|A|G|1157
4JYA|1|A|A|1158
4JYA|1|A|G|1159
4JYA|1|A|G|1160
4JYA|1|A|A|1161
4JYA|1|A|A|1162
4JYA|1|A|G|1163
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain B
- 30S ribosomal protein S2
- Chain I
- 30S ribosomal protein S9
Coloring options: