IL_4JYA_050

3D structure

PDB id

4JYA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structures of pseudouridinilated stop codons with ASLs

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CUACAAAG*CAAAAAGG

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4JYA|1|A|C|1228
4JYA|1|A|U|1229
4JYA|1|A|A|1230
4JYA|1|A|C|1231
4JYA|1|A|A|1232
4JYA|1|A|A|1233
4JYA|1|A|A|1234
4JYA|1|A|G|1235
*
4JYA|1|A|C|1266
4JYA|1|A|A|1267
4JYA|1|A|A|1268
4JYA|1|A|A|1269
4JYA|1|A|A|1270
4JYA|1|A|A|1271
4JYA|1|A|G|1272
4JYA|1|A|G|1273

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain G

30S ribosomal protein S7

Chain I

30S ribosomal protein S9

Chain J

30S ribosomal protein S10

Chain N

30S ribosomal protein S14

Chain U

30S ribosomal protein THX