IL_4K0K_050

3D structure

PDB id

4K0K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 30S ribosomal subunit complexed with a serine-ASL and mRNA containing a stop codon

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

UACAAAG*CAAAAAG

Length

14 nucleotides

Bulged bases

4K0K|1|A|A|1230

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4K0K|1|A|U|1229
4K0K|1|A|A|1230
4K0K|1|A|C|1231
4K0K|1|A|A|1232
4K0K|1|A|A|1233
4K0K|1|A|A|1234
4K0K|1|A|G|1235
*
4K0K|1|A|C|1266
4K0K|1|A|A|1267
4K0K|1|A|A|1268
4K0K|1|A|A|1269
4K0K|1|A|A|1270
4K0K|1|A|A|1271
4K0K|1|A|G|1272

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain G

30S ribosomal protein S7

Chain I

30S ribosomal protein S9

Chain J

30S ribosomal protein S10

Chain N

30S ribosomal protein S14

Chain U

30S ribosomal protein THX