IL_4K0K_067

3D structure

PDB id

4K0K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 30S ribosomal subunit complexed with a serine-ASL and mRNA containing a stop codon

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

GGAGCG*CGUGAC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4K0K|1|A|G|1399
4K0K|1|A|G|1400
4K0K|1|A|A|1401
4K0K|1|A|G|1402
4K0K|1|A|C|1403
4K0K|1|A|G|1404
*
4K0K|1|A|C|1457
4K0K|1|A|G|1458
4K0K|1|A|U|1459
4K0K|1|A|G|1460
4K0K|1|A|A|1461
4K0K|1|A|C|1462

Current chains

Chain A

16S ribosomal RNA

Nearby chains