IL_4K4Y_003

3D structure

PDB id

4K4Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Coxsackievirus B3 polymerase elongation complex (r2+1_form)

Experimental method

X-RAY DIFFRACTION

Resolution

2.72 Å

Loop

Sequence

CAGGU*A(DOC)G

Length

8 nucleotides

Bulged bases

4K4Y|1|F|A|599

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4K4Y|1|F|C|598
4K4Y|1|F|A|599
4K4Y|1|F|G|600
4K4Y|1|F|G|601
4K4Y|1|F|U|602
*
4K4Y|1|G|A|700
4K4Y|1|G|DOC|701
4K4Y|1|H|G|803

Current chains

Chain F

RNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*GP*AP*AP*A)-3')

Chain G

DNA/RNA (5'-R(*UP*GP*UP*UP*CP*GP*AP*CP*GP*AP*GP*AP*GP*AP*(DOC))-3')

Chain H

RNA (5'-R(*GP*GP*GP*AP*GP*AP*UP*GP*A)-3')

Nearby chains

Chain E

RNA-dependent RNA polymerase