IL_4KHP_018
3D structure
- PDB id
- 4KHP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Thermus thermophilus 30S ribosomal subunit in complex with de-6-MSA-pactamycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GGAAGAAG*UGUAAAC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4KHP_018 not in the Motif Atlas
- Homologous match to IL_4LFB_017
- Geometric discrepancy: 0.087
- The information below is about IL_4LFB_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_62329.1
- Basepair signature
- cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW
- Number of instances in this motif group
- 2
Unit IDs
4KHP|1|A|G|405
4KHP|1|A|G|406
4KHP|1|A|A|407
4KHP|1|A|A|408
4KHP|1|A|G|409
4KHP|1|A|A|410
4KHP|1|A|A|411
4KHP|1|A|G|412
*
4KHP|1|A|U|423
4KHP|1|A|G|424
4KHP|1|A|U|425
4KHP|1|A|A|426
4KHP|1|A|A|427
4KHP|1|A|A|428
4KHP|1|A|C|429
Current chains
- Chain A
- 16S Ribosomal RNA
Nearby chains
- Chain D
- 30S Ribosomal protein S4
Coloring options: