IL_4KVB_041

3D structure

PDB id

4KVB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus HB27 30S ribosomal subunit lacking ribosomal protein S17

Experimental method

X-RAY DIFFRACTION

Resolution

4.2 Å

Loop

Sequence

UAGGGAACCC*GGGGUGCCCCGCGAGGGGAGCCCUA

Length

35 nucleotides

Bulged bases

4KVB|1|A|C|1028, 4KVB|1|A|C|1030|||B, 4KVB|1|A|A|1030|||D

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4KVB|1|A|U|1000
4KVB|1|A|A|1001
4KVB|1|A|G|1002
4KVB|1|A|G|1003
4KVB|1|A|G|1003|||A
4KVB|1|A|A|1004
4KVB|1|A|A|1005
4KVB|1|A|C|1006
4KVB|1|A|C|1007
4KVB|1|A|C|1008
*
4KVB|1|A|G|1021
4KVB|1|A|G|1022
4KVB|1|A|G|1023
4KVB|1|A|G|1024
4KVB|1|A|U|1025
4KVB|1|A|G|1026
4KVB|1|A|C|1027
4KVB|1|A|C|1028
4KVB|1|A|C|1029
4KVB|1|A|C|1030
4KVB|1|A|G|1030|||A
4KVB|1|A|C|1030|||B
4KVB|1|A|G|1030|||C
4KVB|1|A|A|1030|||D
4KVB|1|A|G|1031
4KVB|1|A|G|1032
4KVB|1|A|G|1033
4KVB|1|A|G|1034
4KVB|1|A|A|1035
4KVB|1|A|G|1036
4KVB|1|A|C|1037
4KVB|1|A|C|1038
4KVB|1|A|C|1039
4KVB|1|A|U|1040
4KVB|1|A|A|1041

Current chains

Chain A

16S rRNA

Nearby chains

Chain N

30S ribosomal protein S14 type Z