IL_4KVB_064

3D structure

PDB id

4KVB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus HB27 30S ribosomal subunit lacking ribosomal protein S17

Experimental method

X-RAY DIFFRACTION

Resolution

4.2 Å

Loop

Sequence

UAGUUG*CACUCUA

Length

13 nucleotides

Bulged bases

4KVB|1|A|U|1125

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4KVB|1|A|U|1122
4KVB|1|A|A|1123
4KVB|1|A|G|1124
4KVB|1|A|U|1125
4KVB|1|A|U|1126
4KVB|1|A|G|1127
*
4KVB|1|A|C|1145
4KVB|1|A|A|1146
4KVB|1|A|C|1147
4KVB|1|A|U|1148
4KVB|1|A|C|1149
4KVB|1|A|U|1150
4KVB|1|A|A|1151

Current chains

Chain A

16S rRNA

Nearby chains

Chain I

30S ribosomal protein S9

Chain J

30S ribosomal protein S10