IL_4KZX_045

3D structure

PDB id

4KZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 40S ribosomal subunit in complex with eIF1.

Experimental method

X-RAY DIFFRACTION

Resolution

7.81 Å

Loop

Sequence

GAC*GC

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4KZX_045 not in the Motif Atlas

Geometric match to IL_7KGA_003

Geometric discrepancy: 0.2753

The information below is about IL_7KGA_003

Detailed Annotation

Single stack bend

Broad Annotation

No text annotation

Motif group

IL_90729.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

30

Unit IDs

4KZX|1|i|G|870
4KZX|1|i|A|871
4KZX|1|i|C|872
*
4KZX|1|i|G|906
4KZX|1|i|C|907

Current chains

Chain i

18S ribosomal RNA

Nearby chains

Chain H

40S ribosomal protein S7

Chain L

40S ribosomal protein S11