IL_4KZX_089

3D structure

PDB id

4KZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 40S ribosomal subunit in complex with eIF1.

Experimental method

X-RAY DIFFRACTION

Resolution

7.81 Å

Loop

Sequence

CGC*GCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: CGC,GCG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4KZX_089 not in the Motif Atlas

Geometric match to IL_4P3U_012

Geometric discrepancy: 0.1423

The information below is about IL_4P3U_012

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

4KZX|1|i|C|1557
4KZX|1|i|G|1558
4KZX|1|i|C|1559
*
4KZX|1|i|G|1566
4KZX|1|i|C|1567
4KZX|1|i|G|1568

Current chains

Chain i

18S ribosomal RNA

Nearby chains

Chain T

40S ribosomal protein S19