IL_4KZX_116
3D structure
- PDB id
- 4KZX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 40S ribosomal subunit in complex with eIF1.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 7.81 Å
Loop
- Sequence
- UGCAUGG*UCUGUGAUG
- Length
- 16 nucleotides
- Bulged bases
- 4KZX|1|i|C|1327, 4KZX|1|i|U|1490, 4KZX|1|i|G|1493
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4KZX_116 not in the Motif Atlas
- Geometric match to IL_4V88_510
- Geometric discrepancy: 0.1641
- The information below is about IL_4V88_510
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_62984.1
- Basepair signature
- cWW-tHS-tWH-cWH-cWW-L-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
4KZX|1|i|U|1325
4KZX|1|i|G|1326
4KZX|1|i|C|1327
4KZX|1|i|A|1328
4KZX|1|i|U|1329
4KZX|1|i|G|1330
4KZX|1|i|G|1331
*
4KZX|1|i|U|1488
4KZX|1|i|C|1489
4KZX|1|i|U|1490
4KZX|1|i|G|1491
4KZX|1|i|U|1492
4KZX|1|i|G|1493
4KZX|1|i|A|1494
4KZX|1|i|U|1495
4KZX|1|i|G|1496
Current chains
- Chain i
- 18S ribosomal RNA
Nearby chains
- Chain D
- 40S ribosomal protein S3
- Chain K
- 40S ribosomal protein S10
- Chain U
- 40S ribosomal protein S20
- Chain d
- 40S ribosomal protein S29
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