IL_4KZX_120

3D structure

PDB id

4KZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 40S ribosomal subunit in complex with eIF1.

Experimental method

X-RAY DIFFRACTION

Resolution

7.81 Å

Loop

Sequence

GCUCAGCGUGUGCCUACC*GUAACCCGUUGAACCC

Length

34 nucleotides

Bulged bases

4KZX|1|i|C|1549, 4KZX|1|i|U|1550, 4KZX|1|i|A|1575, 4KZX|1|i|C|1576, 4KZX|1|i|U|1580, 4KZX|1|i|G|1582

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4KZX|1|i|G|1536
4KZX|1|i|C|1537
4KZX|1|i|U|1538
4KZX|1|i|C|1539
4KZX|1|i|A|1540
4KZX|1|i|G|1541
4KZX|1|i|C|1542
4KZX|1|i|G|1543
4KZX|1|i|U|1544
4KZX|1|i|G|1545
4KZX|1|i|U|1546
4KZX|1|i|G|1547
4KZX|1|i|C|1548
4KZX|1|i|C|1549
4KZX|1|i|U|1550
4KZX|1|i|A|1551
4KZX|1|i|C|1552
4KZX|1|i|C|1553
*
4KZX|1|i|G|1572
4KZX|1|i|U|1573
4KZX|1|i|A|1574
4KZX|1|i|A|1575
4KZX|1|i|C|1576
4KZX|1|i|C|1577
4KZX|1|i|C|1578
4KZX|1|i|G|1579
4KZX|1|i|U|1580
4KZX|1|i|U|1581
4KZX|1|i|G|1582
4KZX|1|i|A|1583
4KZX|1|i|A|1584
4KZX|1|i|C|1585
4KZX|1|i|C|1586
4KZX|1|i|C|1587

Current chains

Chain i

18S ribosomal RNA

Nearby chains

Chain D

40S ribosomal protein S3

Chain F

40S ribosomal protein S5

Chain K

40S ribosomal protein S10

Chain Q

40S ribosomal protein S16

Chain T

40S ribosomal protein S19

Chain U

40S ribosomal protein S20

Chain Z

40S ribosomal protein S25

Chain d

40S ribosomal protein S29