IL_4KZY_023

3D structure

PDB id

4KZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 40S ribosomal subunit in complex with eIF1 and eIF1A.

Experimental method

X-RAY DIFFRACTION

Resolution

7.01 Å

Loop

Sequence

UUUCGA*UG

Length

8 nucleotides

Bulged bases

4KZY|1|i|U|358, 4KZY|1|i|C|359

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4KZY_023 not in the Motif Atlas

Geometric match to IL_5Y58_001

Geometric discrepancy: 0.2453

The information below is about IL_5Y58_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_45649.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

4KZY|1|i|U|356
4KZY|1|i|U|357
4KZY|1|i|U|358
4KZY|1|i|C|359
4KZY|1|i|G|360
4KZY|1|i|A|361
*
4KZY|1|i|U|383
4KZY|1|i|G|384

Current chains

Chain i

18S Ribosomal RNA

Nearby chains

Chain I

40S Ribosomal Protein S8

Chain L

40S Ribosomal Protein S11