3D structure

PDB id
4KZY (explore in PDB, NAKB, or RNA 3D Hub)
Description
Rabbit 40S ribosomal subunit in complex with eIF1 and eIF1A.
Experimental method
X-RAY DIFFRACTION
Resolution
7.01 Å

Loop

Sequence
ACUAG*CUUCU
Length
10 nucleotides
Bulged bases
4KZY|1|i|C|1399, 4KZY|1|i|U|1400
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4KZY_083 not in the Motif Atlas
Homologous match to IL_8CRE_459
Geometric discrepancy: 0.3214
The information below is about IL_8CRE_459
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4KZY|1|i|A|1398
4KZY|1|i|C|1399
4KZY|1|i|U|1400
4KZY|1|i|A|1401
4KZY|1|i|G|1402
*
4KZY|1|i|C|1436
4KZY|1|i|U|1437
4KZY|1|i|U|1438
4KZY|1|i|C|1439
4KZY|1|i|U|1440

Current chains

Chain i
18S Ribosomal RNA

Nearby chains

Chain Q
40S Ribosomal Protein S16
Chain U
40S Ribosomal Protein S20
Chain g
40S Ribosomal Protein RACK1

Coloring options:


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