IL_4KZY_093

3D structure

PDB id

4KZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 40S ribosomal subunit in complex with eIF1 and eIF1A.

Experimental method

X-RAY DIFFRACTION

Resolution

7.01 Å

Loop

Sequence

GGGAUCG*CAUGAAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4KZY_093 not in the Motif Atlas

Homologous match to IL_8C3A_469

Geometric discrepancy: 0.1521

The information below is about IL_8C3A_469

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_10092.1

Basepair signature

cWW-tSH-tSH-L-R-cWW-L-R-cWW

Number of instances in this motif group

1

Unit IDs

4KZY|1|i|G|1599
4KZY|1|i|G|1600
4KZY|1|i|G|1601
4KZY|1|i|A|1602
4KZY|1|i|U|1603
4KZY|1|i|C|1604
4KZY|1|i|G|1605
*
4KZY|1|i|C|1624
4KZY|1|i|A|1625
4KZY|1|i|U|1626
4KZY|1|i|G|1627
4KZY|1|i|A|1628
4KZY|1|i|A|1629
4KZY|1|i|C|1630

Current chains

Chain i

18S Ribosomal RNA

Nearby chains

Chain S

40S Ribosomal Protein S18

Chain T

40S Ribosomal Protein S19