IL_4KZY_124

3D structure

PDB id

4KZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 40S ribosomal subunit in complex with eIF1 and eIF1A.

Experimental method

X-RAY DIFFRACTION

Resolution

7.01 Å

Loop

Sequence

GCUCAGCGUGUGCCUACC*GUAACCCGUUGAACCC

Length

34 nucleotides

Bulged bases

4KZY|1|i|C|1549, 4KZY|1|i|U|1550, 4KZY|1|i|A|1575, 4KZY|1|i|C|1576, 4KZY|1|i|U|1580, 4KZY|1|i|G|1582

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4KZY|1|i|G|1536
4KZY|1|i|C|1537
4KZY|1|i|U|1538
4KZY|1|i|C|1539
4KZY|1|i|A|1540
4KZY|1|i|G|1541
4KZY|1|i|C|1542
4KZY|1|i|G|1543
4KZY|1|i|U|1544
4KZY|1|i|G|1545
4KZY|1|i|U|1546
4KZY|1|i|G|1547
4KZY|1|i|C|1548
4KZY|1|i|C|1549
4KZY|1|i|U|1550
4KZY|1|i|A|1551
4KZY|1|i|C|1552
4KZY|1|i|C|1553
*
4KZY|1|i|G|1572
4KZY|1|i|U|1573
4KZY|1|i|A|1574
4KZY|1|i|A|1575
4KZY|1|i|C|1576
4KZY|1|i|C|1577
4KZY|1|i|C|1578
4KZY|1|i|G|1579
4KZY|1|i|U|1580
4KZY|1|i|U|1581
4KZY|1|i|G|1582
4KZY|1|i|A|1583
4KZY|1|i|A|1584
4KZY|1|i|C|1585
4KZY|1|i|C|1586
4KZY|1|i|C|1587

Current chains

Chain i

18S Ribosomal RNA

Nearby chains

Chain D

40S Ribosomal Protein S3

Chain F

40S Ribosomal Protein S5

Chain K

40S Ribosomal Protein S10

Chain Q

40S Ribosomal Protein S16

Chain T

40S Ribosomal Protein S19

Chain U

40S Ribosomal Protein S20

Chain Z

40S Ribosomal Protein S25

Chain d

40S Ribosomal Protein S29