IL_4KZY_129

3D structure

PDB id

4KZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 40S ribosomal subunit in complex with eIF1 and eIF1A.

Experimental method

X-RAY DIFFRACTION

Resolution

7.01 Å

Loop

Sequence

UC*GGA

Length

5 nucleotides

Bulged bases

4KZY|1|i|G|497

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4KZY_129 not in the Motif Atlas

Homologous match to IL_8P9A_398

Geometric discrepancy: 0.1393

The information below is about IL_8P9A_398

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_28408.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

69

Unit IDs

4KZY|1|i|U|485
4KZY|1|i|C|486
*
4KZY|1|i|G|496
4KZY|1|i|G|497
4KZY|1|i|A|498

Current chains

Chain i

18S Ribosomal RNA

Nearby chains

Chain E

40S Ribosomal Protein S4X

Chain Y

40S Ribosomal Protein S24