IL_4KZZ_032
3D structure
- PDB id
- 4KZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 40S ribosomal subunit in complex with mRNA, initiator tRNA and eIF1A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 7.03 Å
Loop
- Sequence
- UCCA*UUAA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4KZZ_032 not in the Motif Atlas
- Geometric match to IL_4LFB_060
- Geometric discrepancy: 0.1922
- The information below is about IL_4LFB_060
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.1
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 44
Unit IDs
4KZZ|1|i|U|556
4KZZ|1|i|C|557
4KZZ|1|i|C|558
4KZZ|1|i|A|559
*
4KZZ|1|i|U|571
4KZZ|1|i|U|572
4KZZ|1|i|A|573
4KZZ|1|i|A|574
Current chains
- Chain i
- 18S Ribosomal RNA
Nearby chains
- Chain J
- 40S Ribosomal Protein S9
- Chain Y
- 40S Ribosomal Protein S24
Coloring options: