IL_4KZZ_091
3D structure
- PDB id
- 4KZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 40S ribosomal subunit in complex with mRNA, initiator tRNA and eIF1A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 7.03 Å
Loop
- Sequence
- GGGAUCG*CAUGAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4KZZ_091 not in the Motif Atlas
- Homologous match to IL_8C3A_469
- Geometric discrepancy: 0.1521
- The information below is about IL_8C3A_469
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_10092.1
- Basepair signature
- cWW-tSH-tSH-L-R-cWW-L-R-cWW
- Number of instances in this motif group
- 1
Unit IDs
4KZZ|1|i|G|1599
4KZZ|1|i|G|1600
4KZZ|1|i|G|1601
4KZZ|1|i|A|1602
4KZZ|1|i|U|1603
4KZZ|1|i|C|1604
4KZZ|1|i|G|1605
*
4KZZ|1|i|C|1624
4KZZ|1|i|A|1625
4KZZ|1|i|U|1626
4KZZ|1|i|G|1627
4KZZ|1|i|A|1628
4KZZ|1|i|A|1629
4KZZ|1|i|C|1630
Current chains
- Chain i
- 18S Ribosomal RNA
Nearby chains
- Chain S
- 40S Ribosomal Protein S18
- Chain T
- 40S Ribosomal Protein S19
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