IL_4L47_189

3D structure

PDB id

4L47 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

UG*UGA

Length

5 nucleotides

Bulged bases

4L47|1|XA|G|388

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4L47_189 not in the Motif Atlas

Geometric match to IL_4LFB_016

Geometric discrepancy: 0.1405

The information below is about IL_4LFB_016

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_00225.14

Basepair signature

cWW-L-cWW

Number of instances in this motif group

50

Unit IDs

4L47|1|XA|U|375
4L47|1|XA|G|376
*
4L47|1|XA|U|387
4L47|1|XA|G|388
4L47|1|XA|A|389

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XP

30S ribosomal protein S16