3D structure

PDB id
4L47 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.22 Å

Loop

Sequence
CUGAC*GGUG
Length
9 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4L47_259 not in the Motif Atlas
Homologous match to IL_7RQB_026
Geometric discrepancy: 0.1278
The information below is about IL_7RQB_026
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_94165.1
Basepair signature
cWW-L-R-L-tHS-cWW
Number of instances in this motif group
1

Unit IDs

4L47|1|YA|C|846
4L47|1|YA|U|847
4L47|1|YA|G|848
4L47|1|YA|A|849
4L47|1|YA|C|850
*
4L47|1|YA|G|928
4L47|1|YA|G|929
4L47|1|YA|U|930
4L47|1|YA|G|931

Current chains

Chain YA
23S rRNA

Nearby chains

Chain Y3
50S ribosomal protein L30

Coloring options:


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