IL_4L71_057

3D structure

PDB id

4L71 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.9 Å

Loop

Sequence

GUC*GCC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4L71_057 not in the Motif Atlas

Geometric match to IL_6CZR_171

Geometric discrepancy: 0.1331

The information below is about IL_6CZR_171

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

183

Unit IDs

4L71|1|QA|G|1435
4L71|1|QA|U|1436
4L71|1|QA|C|1437
*
4L71|1|QA|G|1464
4L71|1|QA|C|1465
4L71|1|QA|C|1466

Current chains

Chain QA

16S Ribosomal RNA

Nearby chains

Chain QT

30S ribosomal protein S20

Chain RA

Large subunit ribosomal RNA; LSU rRNA

Chain RT

50S ribosomal protein L19