3D structure

PDB id
4LEL (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.9 Å

Loop

Sequence
GUC*GUC
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4LEL_043 not in the Motif Atlas
Geometric match to IL_4LFB_047
Geometric discrepancy: 0.1345
The information below is about IL_4LFB_047
Detailed Annotation
Isolated non-canonical cWW pair
Broad Annotation
No text annotation
Motif group
IL_28037.2
Basepair signature
cWW-cWW-cWW
Number of instances in this motif group
65

Unit IDs

4LEL|1|QA|G|1061
4LEL|1|QA|U|1062
4LEL|1|QA|C|1063
*
4LEL|1|QA|G|1193
4LEL|1|QA|U|1194
4LEL|1|QA|C|1195

Current chains

Chain QA
16S rRNA

Nearby chains

Chain QC
30S ribosomal protein S3
Chain QE
30S ribosomal protein S5
Chain QI
30S ribosomal protein S9
Chain QJ
30S ribosomal protein S10
Chain QN
30S ribosomal protein S14
Chain QX
A-site ASL SufA6

Coloring options:


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