3D structure

PDB id
4LEL (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.9 Å

Loop

Sequence
CCU*AUG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4LEL_073 not in the Motif Atlas
Homologous match to IL_4WF9_017
Geometric discrepancy: 0.1102
The information below is about IL_4WF9_017
Detailed Annotation
Isolated non-canonical cWW pair
Broad Annotation
No text annotation
Motif group
IL_71625.1
Basepair signature
cWW-cWW-cWW
Number of instances in this motif group
65

Unit IDs

4LEL|1|RA|C|564
4LEL|1|RA|C|565
4LEL|1|RA|U|566
*
4LEL|1|RA|A|575
4LEL|1|RA|U|576
4LEL|1|RA|G|577

Current chains

Chain RA
23S rRNA

Nearby chains

Chain R5
50S ribosomal protein L32
Chain RP
50S ribosomal protein L15
Chain RU
50S ribosomal protein L20
Chain RV
50S ribosomal protein L21

Coloring options:


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