IL_4LEL_076

3D structure

PDB id

4LEL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.9 Å

Loop

Sequence

GAAAC*GAGAUAGC

Length

13 nucleotides

Bulged bases

4LEL|1|RA|G|801, 4LEL|1|RA|G|805

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4LEL_076 not in the Motif Atlas

Geometric match to IL_4WF9_021

Geometric discrepancy: 0.1069

The information below is about IL_4WF9_021

Detailed Annotation

tHW-tHW cross-strand stack

Broad Annotation

No text annotation

Motif group

IL_54041.2

Basepair signature

cWW-L-R-L-R-tWH-L-cWW

Number of instances in this motif group

7

Unit IDs

4LEL|1|RA|G|674
4LEL|1|RA|A|675
4LEL|1|RA|A|676
4LEL|1|RA|A|677
4LEL|1|RA|C|678
*
4LEL|1|RA|G|799
4LEL|1|RA|A|800
4LEL|1|RA|G|801
4LEL|1|RA|A|802
4LEL|1|RA|U|803
4LEL|1|RA|A|804
4LEL|1|RA|G|805
4LEL|1|RA|C|806

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RF

50S ribosomal protein L4

Chain RP

50S ribosomal protein L15