3D structure

PDB id
4LEL (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.9 Å

Loop

Sequence
CGUU*AAGUG
Length
9 nucleotides
Bulged bases
4LEL|1|RA|G|1248
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4LEL_101 not in the Motif Atlas
Geometric match to IL_4WF9_110
Geometric discrepancy: 0.3345
The information below is about IL_4WF9_110
Detailed Annotation
Tandem non-canonical cWW pairs
Broad Annotation
No text annotation
Motif group
IL_51479.1
Basepair signature
cWW-L-R-L-cWW
Number of instances in this motif group
10

Unit IDs

4LEL|1|RA|C|1196
4LEL|1|RA|G|1197
4LEL|1|RA|U|1198
4LEL|1|RA|U|1199
*
4LEL|1|RA|A|1246
4LEL|1|RA|A|1247
4LEL|1|RA|G|1248
4LEL|1|RA|U|1249
4LEL|1|RA|G|1250

Current chains

Chain RA
23S rRNA

Nearby chains

Chain RF
50S ribosomal protein L4
Chain RP
50S ribosomal protein L15
Chain RU
50S ribosomal protein L20

Coloring options:


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