3D structure

PDB id
4LEL (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.9 Å

Loop

Sequence
GGAAGAAG*UGUAAAC
Length
15 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4LEL_188 not in the Motif Atlas
Homologous match to IL_4LFB_017
Geometric discrepancy: 0.1261
The information below is about IL_4LFB_017
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_28026.3
Basepair signature
cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW
Number of instances in this motif group
2

Unit IDs

4LEL|1|XA|G|409
4LEL|1|XA|G|410
4LEL|1|XA|A|411
4LEL|1|XA|A|412
4LEL|1|XA|G|413
4LEL|1|XA|A|414
4LEL|1|XA|A|415
4LEL|1|XA|G|416
*
4LEL|1|XA|U|427
4LEL|1|XA|G|428
4LEL|1|XA|U|429
4LEL|1|XA|A|430
4LEL|1|XA|A|431
4LEL|1|XA|A|432
4LEL|1|XA|C|433

Current chains

Chain XA
16S rRNA

Nearby chains

Chain XD
30S ribosomal protein S4

Coloring options:


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