IL_4LEL_188

3D structure

PDB id

4LEL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.9 Å

Loop

Sequence

GGAAGAAG*UGUAAAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4LEL_188 not in the Motif Atlas

Homologous match to IL_4LFB_017

Geometric discrepancy: 0.1261

The information below is about IL_4LFB_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_62329.1

Basepair signature

cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW

Number of instances in this motif group

2

Unit IDs

4LEL|1|XA|G|409
4LEL|1|XA|G|410
4LEL|1|XA|A|411
4LEL|1|XA|A|412
4LEL|1|XA|G|413
4LEL|1|XA|A|414
4LEL|1|XA|A|415
4LEL|1|XA|G|416
*
4LEL|1|XA|U|427
4LEL|1|XA|G|428
4LEL|1|XA|U|429
4LEL|1|XA|A|430
4LEL|1|XA|A|431
4LEL|1|XA|A|432
4LEL|1|XA|C|433

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XD

30S ribosomal protein S4