3D structure

PDB id
4LEL (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.9 Å

Loop

Sequence
GGAACUCUG*CUGUC
Length
14 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4LEL_295 not in the Motif Atlas
Homologous match to IL_9DFE_066
Geometric discrepancy: 0.1045
The information below is about IL_9DFE_066
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_22854.4
Basepair signature
cWW-tSH-cWW-tHW-R-L-cWW-L-L-R
Number of instances in this motif group
7

Unit IDs

4LEL|1|YA|G|1666
4LEL|1|YA|G|1667
4LEL|1|YA|A|1668
4LEL|1|YA|A|1669
4LEL|1|YA|C|1670
4LEL|1|YA|U|1671
4LEL|1|YA|C|1672
4LEL|1|YA|U|1673
4LEL|1|YA|G|1674
*
4LEL|1|YA|C|1990
4LEL|1|YA|U|1991
4LEL|1|YA|G|1992
4LEL|1|YA|U|1993
4LEL|1|YA|C|1994

Current chains

Chain YA
23S rRNA

Nearby chains

Chain YE
50S ribosomal protein L3
Chain YO
50S ribosomal protein L14

Coloring options:


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