3D structure

PDB id
4LEL (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.9 Å

Loop

Sequence
GAUAAC*GGAAGC
Length
12 nucleotides
Bulged bases
4LEL|1|YA|A|2765
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4LEL_334 not in the Motif Atlas
Homologous match to IL_7RQB_107
Geometric discrepancy: 0.0991
The information below is about IL_7RQB_107
Detailed Annotation
UAA/GAN with extra cWW
Broad Annotation
No text annotation
Motif group
IL_49767.5
Basepair signature
cWW-cWW-tWH-L-tHS-cWW
Number of instances in this motif group
5

Unit IDs

4LEL|1|YA|G|2737
4LEL|1|YA|A|2738
4LEL|1|YA|U|2739
4LEL|1|YA|A|2740
4LEL|1|YA|A|2741
4LEL|1|YA|C|2742
*
4LEL|1|YA|G|2762
4LEL|1|YA|G|2763
4LEL|1|YA|A|2764
4LEL|1|YA|A|2765
4LEL|1|YA|G|2766
4LEL|1|YA|C|2767

Current chains

Chain YA
23S rRNA

Nearby chains

Chain Y9
50S ribosomal protein L36
Chain YH
50S ribosomal protein L6
Chain YN
50S ribosomal protein L13

Coloring options:


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