3D structure

PDB id
4LF6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
Experimental method
X-RAY DIFFRACTION
Resolution
3.31 Å

Loop

Sequence
GUUGCCAGCG*CGGGCACUC
Length
19 nucleotides
Bulged bases
4LF6|1|A|U|1125, 4LF6|1|A|C|1129
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4LF6|1|A|G|1124
4LF6|1|A|U|1125
4LF6|1|A|U|1126
4LF6|1|A|G|1127
4LF6|1|A|C|1128
4LF6|1|A|C|1129
4LF6|1|A|A|1130
4LF6|1|A|G|1131
4LF6|1|A|C|1132
4LF6|1|A|G|1133
*
4LF6|1|A|C|1141
4LF6|1|A|G|1142
4LF6|1|A|G|1143
4LF6|1|A|G|1144
4LF6|1|A|C|1145
4LF6|1|A|A|1146
4LF6|1|A|C|1147
4LF6|1|A|U|1148
4LF6|1|A|C|1149

Current chains

Chain A
16S rRNA

Nearby chains

Chain I
ribosomal protein S9
Chain J
ribosomal protein S10

Coloring options:

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