IL_4LFA_050

3D structure

PDB id

4LFA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of 30S ribosomal subunit from Thermus thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

3.65 Å

Loop

Sequence

CUGC*GAGGAAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4LFA_050 not in the Motif Atlas

Homologous match to IL_4LFB_050

Geometric discrepancy: 0.1023

The information below is about IL_4LFB_050

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_42032.1

Basepair signature

cWW-cSH-cWW-tWH-L-cWW-L-L

Number of instances in this motif group

2

Unit IDs

4LFA|1|A|C|1158
4LFA|1|A|U|1159
4LFA|1|A|G|1160
4LFA|1|A|C|1161
*
4LFA|1|A|G|1175
4LFA|1|A|A|1176
4LFA|1|A|G|1177
4LFA|1|A|G|1178
4LFA|1|A|A|1179
4LFA|1|A|A|1180
4LFA|1|A|G|1181

Current chains

Chain A

16S rRNA

Nearby chains

Chain B

ribosomal protein S2

Chain I

ribosomal protein S9