IL_4LFA_072

3D structure

PDB id

4LFA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of 30S ribosomal subunit from Thermus thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

3.65 Å

Loop

Sequence

(5MC)ACGCCAUG*UGGGGCGAAG

Length

19 nucleotides

Bulged bases

4LFA|1|A|A|1493

QA status

Modified nucleotides: 5MC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4LFA|1|A|5MC|1407
4LFA|1|A|A|1408
4LFA|1|A|C|1409
4LFA|1|A|G|1410
4LFA|1|A|C|1411
4LFA|1|A|C|1412
4LFA|1|A|A|1413
4LFA|1|A|U|1414
4LFA|1|A|G|1415
*
4LFA|1|A|U|1485
4LFA|1|A|G|1486
4LFA|1|A|G|1487
4LFA|1|A|G|1488
4LFA|1|A|G|1489
4LFA|1|A|C|1490
4LFA|1|A|G|1491
4LFA|1|A|A|1492
4LFA|1|A|A|1493
4LFA|1|A|G|1494

Current chains

Chain A

16S rRNA

Nearby chains

Chain L

ribosomal protein S12