IL_4LFB_009

3D structure

PDB id

4LFB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of 30S ribosomal subunit from Thermus thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

3.01 Å

Loop

Sequence

GACAAC*GCUAAUC

Length

13 nucleotides

Bulged bases

4LFB|1|A|U|173

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

tWH-tWH-tHW-tHW

Broad Annotation

No text annotation

Motif group

IL_12745.1

Basepair signature

cWW-tWH-tWH-tHW-tHW-cWW

Number of instances in this motif group

1

Unit IDs

4LFB|1|A|G|148
4LFB|1|A|A|149
4LFB|1|A|C|150
4LFB|1|A|A|151
4LFB|1|A|A|152
4LFB|1|A|C|153
*
4LFB|1|A|G|168
4LFB|1|A|C|169
4LFB|1|A|U|170
4LFB|1|A|A|171
4LFB|1|A|A|172
4LFB|1|A|U|173
4LFB|1|A|C|174

Current chains

Chain A

16S rRNA

Nearby chains

Chain T

ribosomal protein S20