IL_4LFB_019

3D structure

PDB id

4LFB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of 30S ribosomal subunit from Thermus thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

3.01 Å

Loop

Sequence

GAAACC*GACUGAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_26564.1

Basepair signature

cWW-L-R-tWH-L-R-L-R-L-cWW

Number of instances in this motif group

2

Unit IDs

4LFB|1|A|G|450
4LFB|1|A|A|451
4LFB|1|A|A|452
4LFB|1|A|A|453
4LFB|1|A|C|454
4LFB|1|A|C|455
*
4LFB|1|A|G|477
4LFB|1|A|A|478
4LFB|1|A|C|479
4LFB|1|A|U|480
4LFB|1|A|G|481
4LFB|1|A|A|482
4LFB|1|A|C|483

Current chains

Chain A

16S rRNA

Nearby chains

Chain P

ribosomal protein S16