IL_4LFB_022

3D structure

PDB id

4LFB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of 30S ribosomal subunit from Thermus thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

3.01 Å

Loop

Sequence

CGUAAAG*CG

Length

9 nucleotides

Bulged bases

4LFB|1|A|A|572

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_38186.5

Basepair signature

cWW-L-cWW-L-L-R

Number of instances in this motif group

5

Unit IDs

4LFB|1|A|C|569
4LFB|1|A|G|570
4LFB|1|A|U|571
4LFB|1|A|A|572
4LFB|1|A|A|573
4LFB|1|A|A|574
4LFB|1|A|G|575
*
4LFB|1|A|C|880
4LFB|1|A|G|881

Current chains

Chain A

16S rRNA

Nearby chains

Chain E

ribosomal protein S5

Chain L

ribosomal protein S12

Chain Q

ribosomal protein S17