IL_4LFB_023

3D structure

PDB id

4LFB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of 30S ribosomal subunit from Thermus thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

3.01 Å

Loop

Sequence

UGUAG*UGAGG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

tSH-tHW-tHS

Broad Annotation

No text annotation

Motif group

IL_17136.6

Basepair signature

cWW-tSH-tHW-tHS-cWW

Number of instances in this motif group

16

Unit IDs

4LFB|1|A|U|580
4LFB|1|A|G|581
4LFB|1|A|U|582
4LFB|1|A|A|583
4LFB|1|A|G|584
*
4LFB|1|A|U|757
4LFB|1|A|G|758
4LFB|1|A|A|759
4LFB|1|A|G|760
4LFB|1|A|G|761

Current chains

Chain A

16S rRNA

Nearby chains

Chain L

ribosomal protein S12

Chain O

ribosomal protein S15

Chain Q

ribosomal protein S17