IL_4LFB_026

3D structure

PDB id

4LFB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of 30S ribosomal subunit from Thermus thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

3.01 Å

Loop

Sequence

UGAAAGAC*GGGGAG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_78349.2

Basepair signature

cWW-tSH-L-R-L-R-L-R-L-cWW-L

Number of instances in this motif group

3

Unit IDs

4LFB|1|A|U|605
4LFB|1|A|G|606
4LFB|1|A|A|607
4LFB|1|A|A|608
4LFB|1|A|A|609
4LFB|1|A|G|610
4LFB|1|A|A|611
4LFB|1|A|C|612
*
4LFB|1|A|G|628
4LFB|1|A|G|629
4LFB|1|A|G|630
4LFB|1|A|G|631
4LFB|1|A|A|632
4LFB|1|A|G|633

Current chains

Chain A

16S rRNA

Nearby chains

Chain D

ribosomal protein S4

Chain H

ribosomal protein S8

Chain P

ribosomal protein S16