IL_4LFB_031

3D structure

PDB id

4LFB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of 30S ribosomal subunit from Thermus thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

3.01 Å

Loop

Sequence

GAGUAG*CGCAGAUAC

Length

15 nucleotides

Bulged bases

4LFB|1|A|A|702

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_37722.1

Basepair signature

cWW-L-tSH-L-tHW-tHS-R-cWW-L

Number of instances in this motif group

2

Unit IDs

4LFB|1|A|G|683
4LFB|1|A|A|684
4LFB|1|A|G|685
4LFB|1|A|U|686
4LFB|1|A|A|687
4LFB|1|A|G|688
*
4LFB|1|A|C|699
4LFB|1|A|G|700
4LFB|1|A|C|701
4LFB|1|A|A|702
4LFB|1|A|G|703
4LFB|1|A|A|704
4LFB|1|A|U|705
4LFB|1|A|A|706
4LFB|1|A|C|707

Current chains

Chain A

16S rRNA

Nearby chains

Chain K

ribosomal protein S11