IL_4LFB_049

3D structure

PDB id

4LFB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of 30S ribosomal subunit from Thermus thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

3.01 Å

Loop

Sequence

CCAGC*GG

Length

7 nucleotides

Bulged bases

4LFB|1|A|C|1129

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_15052.2

Basepair signature

cWW-cWW-cWW-R

Number of instances in this motif group

8

Unit IDs

4LFB|1|A|C|1128
4LFB|1|A|C|1129
4LFB|1|A|A|1130
4LFB|1|A|G|1131
4LFB|1|A|C|1132
*
4LFB|1|A|G|1142
4LFB|1|A|G|1143

Current chains

Chain A

16S rRNA

Nearby chains

Chain I

ribosomal protein S9