IL_4LFB_051

3D structure

PDB id

4LFB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of 30S ribosomal subunit from Thermus thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

3.01 Å

Loop

Sequence

UACAAAG*CAAAAAG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_09129.1

Basepair signature

cWW-tWH-tWH-L-R-L-R-tWW-cWW

Number of instances in this motif group

3

Unit IDs

4LFB|1|A|U|1247
4LFB|1|A|A|1248
4LFB|1|A|C|1249
4LFB|1|A|A|1250
4LFB|1|A|A|1251
4LFB|1|A|A|1252
4LFB|1|A|G|1253
*
4LFB|1|A|C|1284
4LFB|1|A|A|1285
4LFB|1|A|A|1286
4LFB|1|A|A|1287
4LFB|1|A|A|1288
4LFB|1|A|A|1289
4LFB|1|A|G|1290

Current chains

Chain A

16S rRNA

Nearby chains

Chain G

ribosomal protein S7

Chain I

ribosomal protein S9

Chain J

ribosomal protein S10

Chain N

ribosomal protein S14

Chain U

ribosomal protein THX