IL_4LFB_052

3D structure

PDB id

4LFB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of 30S ribosomal subunit from Thermus thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

3.01 Å

Loop

Sequence

GAUG*CUAAUC

Length

10 nucleotides

Bulged bases

4LFB|1|A|U|1257, 4LFB|1|A|U|1278, 4LFB|1|A|A|1280, 4LFB|1|A|U|1281

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

180 degree turn

Broad Annotation

No text annotation

Motif group

IL_11344.2

Basepair signature

cWW-cSS-L-cWW

Number of instances in this motif group

2

Unit IDs

4LFB|1|A|G|1255
4LFB|1|A|A|1256
4LFB|1|A|U|1257
4LFB|1|A|G|1258
*
4LFB|1|A|C|1277
4LFB|1|A|U|1278
4LFB|1|A|A|1279
4LFB|1|A|A|1280
4LFB|1|A|U|1281
4LFB|1|A|C|1282

Current chains

Chain A

16S rRNA

Nearby chains

Chain C

ribosomal protein S3

Chain I

ribosomal protein S9

Chain J

ribosomal protein S10

Chain N

ribosomal protein S14