IL_4LFZ_081

3D structure

PDB id

4LFZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of Paromomycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.92 Å

Loop

Sequence

CGC*GGAG

Length

7 nucleotides

Bulged bases

4LFZ|1|RA|G|932

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4LFZ_081 not in the Motif Atlas

Homologous match to IL_9DFE_023

Geometric discrepancy: 0.5273

The information below is about IL_9DFE_023

Detailed Annotation

Other IL

Broad Annotation

Other IL

Motif group

IL_10892.1

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

39

Unit IDs

4LFZ|1|RA|C|844
4LFZ|1|RA|G|845
4LFZ|1|RA|C|846
*
4LFZ|1|RA|G|931
4LFZ|1|RA|G|932
4LFZ|1|RA|A|933
4LFZ|1|RA|G|934

Current chains

Chain RA

23S rRNA

Nearby chains

Chain R3

50S ribosomal protein L30