IL_4LFZ_082

3D structure

PDB id

4LFZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of Paromomycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.92 Å

Loop

Sequence

CUGAC*GGUG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4LFZ_082 not in the Motif Atlas

Homologous match to IL_7RQB_026

Geometric discrepancy: 0.2059

The information below is about IL_7RQB_026

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_94165.1

Basepair signature

cWW-L-R-L-tHS-cWW

Number of instances in this motif group

1

Unit IDs

4LFZ|1|RA|C|846
4LFZ|1|RA|U|847
4LFZ|1|RA|G|848
4LFZ|1|RA|A|849
4LFZ|1|RA|C|850
*
4LFZ|1|RA|G|928
4LFZ|1|RA|G|929
4LFZ|1|RA|U|930
4LFZ|1|RA|G|931

Current chains

Chain RA

23S rRNA

Nearby chains

Chain R3

50S ribosomal protein L30