IL_4LFZ_369

3D structure

PDB id

4LFZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of Paromomycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.92 Å

Loop

Sequence

GGG*UACC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4LFZ_369 not in the Motif Atlas

Geometric match to IL_5B2P_002

Geometric discrepancy: 0.3836

The information below is about IL_5B2P_002

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_07785.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

33

Unit IDs

4LFZ|1|YA|G|272
4LFZ|1|YA|G|273
4LFZ|1|YA|G|273|||A
*
4LFZ|1|YA|U|363|||E
4LFZ|1|YA|A|363|||F
4LFZ|1|YA|C|364
4LFZ|1|YA|C|365

Current chains

Chain YA

23S rRNA

Nearby chains